The Gulf Star Conference folded after the 1986 season when four of its founding members, Northwestern State, Sam Houston State, Southwest Texas State, and Stephen F. Austin, joined the Southland Conference. The Gulf Star's remaining football member, Nicholls State, opted to become an Independent. Three former Southland Conference members, Arkansas State, Lamar, and Louisiana Tech, moved to D-IAA Independent status after joining the newly formed (non-football) American South Conference as charter members.
The Mid-Eastern Athletic Conference (MEAC) conference champion Howard Bison (9–1) did not receive an invitation to the I-AA playoffs and filed a lawsuit against the NCAA and sought a temporary restraining order to delay the start of the playoffs.[5] The lawsuit asserted "unlawful and racially motivated reasons" for the team being passed over.[5] Two days later, the request for a temporary restraining order was rejected by federal judgeJohn Garrett Penn.[6] Howard then advocated that they, plus three other teams, should be added to the second round of the playoffs; the proposal was rejected by the NCAA, who said that Howard had played a weak schedule.[7] In September 1989, MEAC stripped Howard of their 1987 conference championship, retroactively awarding it to Delaware State, after finding that Howard had used some players beyond their four years of NCAA eligibility.[8]
The I-AA playoff field remained at sixteen through the 2009 season, expanding to twenty in 2010 and 24 in 2013.