User:TiagoLubiana/sandbox
Candidate pages for the Wikipedia ISCB competition:
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Wikidata list of OBO Foundry ontologies
This list is automatically generated from data in Wikidata and is periodically updated by Listeriabot.
Edits made within the list area will be removed on the next update!
[edit]
| title | description | official page |
|---|---|---|
| Anatomical Entity Ontology | Ontology of anatomical structures that expand CARO, the Common Anatomy Reference Ontology. | https://github.com/obophenotype/human-developmental-anatomy-ontology/ |
| Beta Cell Genomics Ontology | An application ontology built for beta cell genomics studies. | https://github.com/obi-bcgo/bcgo |
| Cephalopod Ontology | anatomical and developmental ontology for cephalopods | https://www.ebi.ac.uk/ols/ontologies/ceph |
| Chemical Entities of Biological Interest | Ontology of small molecular entities of biological interest | http://www.ebi.ac.uk/chebi |
| Cigarette Smoke Exposure Ontology | Ontology to describe exposure to environmental factors that might influence clinical outcomes. | http://www.jbiomedsem.com/content/pdf/2041-1480-5-31.pdf http://ctdbase.org/help/exposureHelp.jsp |
| Evidence & Conclusion Ontology | An ontology for types evidence used to support scientific claims. | http://jodischneider.com/pubs/dikr2014.pdf https://github.com/evidenceontology/evidenceontology/ |
| Evidence and Conclusion Ontology | support assertions about things (such as scientific conclusions, gene annotations, or other statements of fact) that result from scientific research | http://www.evidenceontology.org/ |
| Gazetteer | open source gazetteer constructed on ontological principles | http://environmentontology.github.io/gaz/ |
| Glycan Naming Ontology | An ontology for glycans based on GlyTouCan | https://github.com/glygen-glycan-data/GNOme |
| Human Disease Ontology | ontology for describing human diseases | http://www.disease-ontology.org |
| Infectious Disease Ontology | A set of ontologies related to infectious diseases. | http://www.bioontology.org/wiki/index.php/Infectious_Disease_Ontology |
| Malaria Ontology | An ontology for concepts related to malaria | http://www.ncbi.nlm.nih.gov/pubmed/20698959 https://www.vectorbase.org/ontology-browser |
| Mosquito gross anatomy ontology | An ontology for the anatomy of mosquitoes. | http://anobase.vectorbase.org |
| Mouse gross anatomy and development, timed | Ontology of anatomical structures of the mouse (Mus musculus). | http://emouseatlas.org |
| Name Reaction Ontology | An ontology for organic reactions in organic synthesis. | https://github.com/rsc-ontologies/rxno |
| Neuroscience Information Framework Cell Ontology | Ontology to describe cell types in animals in general. | http://bioportal.bioontology.org/ontologies/NIFCELL?p=classes&conceptid=root https://github.com/obophenotype/cell-ontology |
| Ontologized MIABIS | An ontological version of MIABIS (Minimum Information About BIobank data Sharing) | https://github.com/OMIABIS/omiabis-dev |
| Ontology for Parasite LifeCycle | ontology | http://code.google.com/p/opl-ontology https://github.com/OPL-ontology/OPL |
| Pathogen Transmission Ontology | OBO ontology of pathogen transmission processes | https://github.com/DiseaseOntology/PathogenTransmissionOntology |
| Software Ontology | An ontology to describe software applications with a focus on bioinformatics tools. | http://jbiomedsem.biomedcentral.com/articles/10.1186/2041-1480-5-25 https://github.com/allysonlister/swo |
| The Data Use Ontology | Ontology for conditions of data use. | https://github.com/EBISPOT/DUO |
| The Drug-Drug Interactions Ontology | Ontology for drug-drug interactions. | http://labda.inf.uc3m.es/doku.php?id=es:labda_dinto |
| The Oral Health and Disease Ontology | An ontology for the content of teeth-related health records. | https://purl.obolibrary.org/obo/ohd/home |
| Tick Anatomy Ontology | An ontology for the anatomy of the tick families Ixodidae and Argassidae. | https://www.vectorbase.org/ontology-browser |
| Vaccination Informed Consent Ontology | An ontology of clinical informed consents | http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0062-4 https://github.com/ICO-ontology/ICO |
| Vaccine Ontology | An ontology for concepts related to vaccines and vaccination | https://violinet.org/vaccineontology/ |
| eagle-i resource ontology | An ontology of research equipment, protocols and consumables. . | https://open.med.harvard.edu/wiki/display/eaglei/Ontology |
| microRNA Ontology | An ontology for use with miRNA databases. | http://code.google.com/p/mirna-ontology/ |
End of auto-generated list.
