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User:Nerdseeksblonde/scriptTest

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This is a computer generated list of references on the topic "pyruvate cycling." I'm testing some scripts to take eutils output and convert to wiki citations. This makes use of the excellent api here,

http://www.ncbi.nlm.nih.gov/entrez/query/static/eutils_help.html

And the JAXB compiler to turn the nih dtd into java code. I still expect to download citaitons in text format rather than structured XML unless I really need reliable parsing. The text scraping is a lot quicker and reasonably reliable as long as they don't change their format which is unlikely.

[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32]


References

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  1. ^ Pongratz, RL; Cline, GW (-2009). "Investigating the roles of mitochondrial and cytosolic malic enzyme in insulin secretion". Methods in enzymology. 457: 425–50. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  2. ^ Heart, E; Collis, LP; Pongratz, RL; Gray, JP; Smith, PJ (Jun-2009). "Role for malic enzyme, pyruvate carboxylation, and mitochondrial malate import in glucose-stimulated insulin secretion". American journal of physiology. Endocrinology and metabolism. 296 (6): E1354-62. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  3. ^ Kley, S; Glushka, J; Jin, ES; Burgess, SC; Waldron, M; Jordan, ET; Prestegard, JH; Ferguson, DC; Wu, S; Olson, DE (Apr-2009). "The impact of obesity, sex, and diet on hepatic glucose production in cats". American journal of physiology. Regulatory, integrative and comparative physiology. 296 (4): R936-43. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  4. ^ Ronnebaum, SM; Hohmeier, HE; Burgess, SC; Zhou, YP; Qian, S; MacNeil, D; Howard, A; Thornberry, N; Ilkayeva, O; Lu, D; Sherry, AD; Newgard, CB (24-Oct-2008). "Silencing of cytosolic or mitochondrial isoforms of malic enzyme has no effect on glucose-stimulated insulin secretion from rodent islets". The Journal of biological chemistry. 283 (43): 28909–17. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  5. ^ Li, C; Chen, P; Buettger, C; Najafi, H; Daikhin, Y; Nissim, I; Collins, HW; Yudkoff, M; Stanley, CA; Matschinsky, FM (20-Jun-2008). "Elimination of KATP channels in mouse islets results in elevated [U-13C]glucose metabolism, glutaminolysis, and pyruvate cycling but a decreased gamma-aminobutyric acid shunt". The Journal of biological chemistry. 283 (25): 17238–49. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  6. ^ Ronnebaum, SM; Ilkayeva, O; Burgess, SC; Lu, D; Becker, TC; Sherry, AD; Newgard, CB (23-May-2008). "Chronic suppression of acetyl-CoA carboxylase 1 in beta-cells impairs insulin secretion via inhibition of glucose rather than lipid metabolism". The Journal of biological chemistry. 283 (21): 14248–56. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  7. ^ Burgess, SC; Jeoung, NH; Harris, RA; Kashiwaya, Y; Veech, RL; Kitazume, T; Uyeda, K (18-Jan-2008). "Carbohydrate-response element-binding protein deletion alters substrate utilization producing an energy-deficient liver". The Journal of biological chemistry. 283 (3): 1670–8. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  8. ^ Guay, C; Aumais, A; Joly, E; Prentki, M (7-Dec-2007). "A role for ATP-citrate lyase, malic enzyme, and pyruvate/citrate cycling in glucose-induced insulin secretion". The Journal of biological chemistry. 282 (49): 35657–65. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  9. ^ Jin, ES; Sherry, AD; Malloy, CR (Mar-2007). "Role of excess glycogenolysis in fasting hyperglycemia among pre-diabetic and diabetic Zucker (fa/fa) rats". Diabetes. 56 (3): 777–85. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  10. ^ Rajas, F; Stefanutti, A; Mrad, EA; Iynedjian, PB; Mithieux, G (May-2007). "Immunocytochemical localization of glucose 6-phosphatase and cytosolic phosphoenolpyruvate carboxykinase in gluconeogenic tissues reveals unsuspected metabolic zonation". Histochemistry and cell biology. 127 (5): 555–65. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  11. ^ Ronnebaum, SM; Burgess, SC; Joseph, JW; Lu, D; Stevens, RD; Becker, TC; Sherry, AD; Newgard, CB; Jensen, MV (13-Oct-2006). "A pyruvate cycling pathway involving cytosolic NADP-dependent isocitrate dehydrogenase regulates glucose-stimulated insulin secretion". The Journal of biological chemistry. 281 (41): 30593–602. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  12. ^ Fransson, U; Schuit, FC; Renström, E; Mulder, H (Jul-2006). "Anaplerosis via pyruvate carboxylase is required for the fuel-induced rise in the ATP:ADP ratio in rat pancreatic islets". Diabetologia. 49 (7): 1578–86. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  13. ^ Jensen, MV; Ilkayeva, O; Burgess, S; Lu, D; Ronnebaum, SM; Odegaard, M; Becker, TC; Sherry, AD; Newgard, CB (4-Aug-2006). "Compensatory responses to pyruvate carboxylase suppression in islet beta-cells. Preservation of glucose-stimulated insulin secretion". The Journal of biological chemistry. 281 (31): 22342–51. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  14. ^ Jin, ES; Merritt, ME; Sherry, AD; Malloy, CR (Apr-2005). "Differing mechanisms of hepatic glucose overproduction in triiodothyronine-treated rats vs. Zucker diabetic fatty rats by NMR analysis of plasma glucose". American journal of physiology. Endocrinology and metabolism. 288 (4): E654-62. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  15. ^ Burgess, SC; Merritt, M; Jeffrey, FM; Storey, C; Milde, A; Koshy, S; Lindner, J; Magnuson, MA; Malloy, CR; Sherry, AD (19-Nov-2004). "Impaired tricarboxylic acid cycle activity in mouse livers lacking cytosolic phosphoenolpyruvate carboxykinase". The Journal of biological chemistry. 279 (47): 48941–9. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  16. ^ Thompson, SN (4-Aug-2004). "Dietary fat mediates hyperglycemia and the glucogenic response to increased protein consumption in an insect, Manduca sexta L." Biochimica et biophysica acta. 1673 (3): 208–16. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  17. ^ Boucher, A; Burgess, SC; Telemaque-Potts, S; Jensen, MV; Mulder, H; Wang, MY; Unger, RH; Sherry, AD; Newgard, CB (25-Jun-2004). "Biochemical mechanism of lipid-induced impairment of glucose-stimulated insulin secretion and reversal with a malate analogue". The Journal of biological chemistry. 279 (26): 27263–71. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  18. ^ Jin, ES; Merritt, M; Burgess, SC; Malloy, CR; Sherry, AD (15-Apr-2004). "Glucose production, gluconeogenesis, and hepatic tricarboxylic acid cycle fluxes measured by nuclear magnetic resonance analysis of a single glucose derivative". Analytical biochemistry. 327 (2): 149–55. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  19. ^ She, P; Shiota, M; Flakoll, P; Donahue, EP; Malloy, CR; Sherry, AD; Magnuson, MA (Jul-2003). "Mechanisms by which liver-specific PEPCK knockout mice preserve euglycemia during starvation". Diabetes. 52 (7): 1649–54. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  20. ^ Thompson, SN; Wang, LW (Mar-2003). "Dietary nutrient levels regulate protein and carbohydrate intake, gluconeogenic/glycolytic flux and blood trehalose level in the insect Manduca sexta L." Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology. 173 (2): 149–63. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  21. ^ Newgard, CB; Jensen, MV; Schissler, J; Boucher, A; Burgess, S; Sherry, AD (Dec-2002). "Stimulus/secretion coupling factors in glucose-stimulated insulin secretion: insights gained from a multidisciplinary approach". Diabetes. 51 Suppl 3: S389-93. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  22. ^ Thompson, SN; Borchardt, DB (6-Jun-2002). "The glucogenic response of a parasitized insect Manduca sexta L. is partially mediated by differential nutrient intake". Biochimica et biophysica acta. 1571 (2): 138–50. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  23. ^ Lu, D; Zhao, P; Burgess, SC; Jensen, MV; Kamzolova, S; Newgard, CB; Sherry, AD (5-Mar-2002). "13C NMR isotopomer analysis reveals a connection between pyruvate cycling and glucose-stimulated insulin secretion (GSIS)". Proceedings of the National Academy of Sciences of the United States of America. 99 (5): 2708–13. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  24. ^ Thompson, SN (Feb-2001). "Parasitism enhances the induction of glucogenesis by the insect, Manduca sexta L." The international journal of biochemistry & cell biology. 33 (2): 163–73. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  25. ^ Thompson, SN (11-Aug-2000). "Pyruvate cycling and implications for regulation of gluconeogenesis in the insect, Manduca sexta L." Biochemical and biophysical research communications. 274 (3): 787–93. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  26. ^ Landau, BR; Schumann, WC; Ekberg, K; Kumaran, K; Kalhan, SC; Wahren, J (Jul-1995). "Estimates of Krebs cycle activity and contributions of gluconeogenesis to hepatic glucose production in fasting healthy subjects and IDDM patients". Diabetologia. 38 (7): 831–8. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  27. ^ Tosh, D; Agius, L (10-Nov-1994). "Glycogen synthesis from glucose by direct and indirect pathways in hepatocyte cultures from different nutritional states". Biochimica et biophysica acta. 1224 (2): 205–12. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  28. ^ Agius, L; Peak, M (1-Jan-1993). "The contribution of pyruvate cycling to loss of [6-3H]glucose during conversion of glucose to glycogen in hepatocytes: effects of insulin, glucose and acinar origin of hepatocytes". The Biochemical journal. 289 ( Pt 1): 255–62. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  29. ^ Gregory, RB (5-May-1992). "Stimulation by thyroid hormone of coupled respiration and of respiration apparently not coupled to the synthesis of ATP in rat hepatocytes". The Journal of biological chemistry. 267 (13): 8903–8. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  30. ^ Kunz, WS (Jan-1991). "Control of reversible intracellular transfer of reducing potential". Archives of biochemistry and biophysics. 284 (1): 40–6. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  31. ^ Scaduto, RC (1-Aug-1986). "The involvement of pyruvate cycling in the metabolism of aspartate and glycerate by the perfused rat kidney". The Biochemical journal. 237 (3): 691–8. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
  32. ^ Rognstad, R (22-Aug-1979). "Pyruvate cycling involving possible oxaloacetate decarboxylase activity". Biochimica et biophysica acta. 586 (2): 242–9. {{cite journal}}: Check date values in: |date= (help)CS1 maint: date and year (link)
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