Talk:Birt–Hogg–Dubé syndrome

Quick mid-development review

Keilana asked me to look through this article and make some comments.

Sourcing

Sourcing

• Happle 2012 - It's an editorial, not a fan of using editorials like this, why not just use this from the NIH for the alternate names?

Done, added Hornstein-Knickenberg syndrome and fibrofolliculomas with trichodiscomas and acrochordons as those were also given as alt names by the NIH. Keilana|^{Parlez ici} 19:28, 18 July 2013 (UTC)

• James 2006 - This is the 10th edition from 2006, per WP:MEDDATE that's a bit old, can you update this source to the 11th edition from 2011?

Done. Keilana|^{Parlez ici} 19:38, 18 July 2013 (UTC)

• Toro 2008 50 families - good
• NIH GHR 2013 - ok
• Birt 1977 - ok for historical
• NORD - I'm unsure about the quality of this source. NORD is a small charity organization, appears unaffiliated with any academic or major medical institution, and the article was written by one researcher, probably not peer-reviewed. If you can't replace the source, ask at WT:MED and see what they say about it.

Okay, I've removed or re-cited all the material that was cited to NORD. Keilana|^{Parlez ici} 20:36, 26 July 2013 (UTC)

• Toro 2008 GeneReviews - excellent
• Furuya 2013 - I think it's OK? Not PUBMED indexed yet apparently, and it's been out long enough that I'd expect it to have a PMID, why doesn't it?

Hmm, I found it on PUBMED and it's indexed in MEDLINE. The PMID is 23223565, I've put that in the citation. It's labeled as a review so I believe it qualifies under MEDRS. Keilana|^{Parlez ici} 20:39, 26 July 2013 (UTC)

Yes, no explanation as to why I didn't find it before! But there it is, MEDLINE-indexed and associated with the BMJ, a fine source. Zad68 21:10, 26 July 2013 (UTC)

Awesome, thanks! Keilana|^{Parlez ici} 21:12, 26 July 2013 (UTC)

• Nickerson 2002 - ok for historical
• Klomp 2010 - primary source, can this information be sourced to a secondary source?

Okay, replaced with a Feb. 2013 review that covered this in pretty decent detail. (Sudarshan et al.) Keilana|^{Parlez ici} 20:50, 26 July 2013 (UTC)

Y Sudarshan looks good. Zad68 21:16, 26 July 2013 (UTC)

• Liu 2013 - primary source, can this information be sourced to a secondary source?

Yes, it was covered in a review which is now cited. Keilana|^{Parlez ici} 20:17, 26 July 2013 (UTC)

• Baba 2006 - primary source from 2006, surely this information has been incorporated into a review article since then?

Taken care of. Keilana|^{Parlez ici} 21:00, 26 July 2013 (UTC)

• Nookala 2012 - primary source

Taken care of. Keilana|^{Parlez ici} 21:00, 26 July 2013 (UTC)

• Linehan 2007 - a bit dated, ideally update to newer secondary source

Updated to Menko 2009. Keilana|^{Parlez ici}

• Menko 2009 - good
• Medscape has been the subject of debate as to whether it's a reliable source per WP:MEDRS or not, you should probably find a different source for the content

I've found the original articles cited by the Medscape author here and here. The first one is a very recent paper and hasn't been cited in any reviews yet. The second paper has been cited in reviews but none of the reviews have mentioned smoking history as causing worse outcomes for BHD, just that smoking causes emphysema and such, which can mask the pulmonary BHD phenotype. What do you think I should do here? I'm not sure. Keilana|^{Parlez ici} 21:00, 26 July 2013 (UTC)

This is a good one to go ahead and ask about at WT:MED. I generally avoid Medscape but you may find other opinions there. Zad68 21:21, 26 July 2013 (UTC)

Okay, I asked over there. I'll see what they say - I'm still new to medical editing and haven't quite absorbed all of the new guidelines. Keilana|^{Parlez ici} 21:30, 26 July 2013 (UTC)

• Burnier 1927 - ok for historical
• OMIM - ok
• BHD Foundation - primary source for itself, should have secondary source to establish its noteworthiness

NORD recognizes it and Home Genetics Reference does as well. Keilana|^{Parlez ici} 16:23, 25 July 2013 (UTC)

Yep I think this mention at the NIH GHR is good enough of an independent secondary source to support the mention, good find. Zad68 16:43, 25 July 2013 (UTC)

In general for well-studied subjects we do not want to be using primary sources. Are any of the primary sources used really necessary, can the information be sourced to secondary sources, or simply eliminated from the article?

I think I've taken care of all these concerns. Do the sources look okay? (ping) Keilana|^{Parlez ici} 04:08, 15 August 2013 (UTC)

Just about to head to bed, remind me in a day or so if I haven't responded... Zad68 04:22, 15 August 2013 (UTC)

Sleep well, you're wonderful. :) Keilana|^{Parlez ici} 04:45, 15 August 2013 (UTC)

Y I checked to make sure the problematic sources were removed and that the new ones added are up to WP:MEDRS standard. Sourcing looks great now! Fine work. I'd be surprised if you got many complaints at all about the sourcing for this article as a GA nominee. Zad68 16:56, 15 August 2013 (UTC)

• Diberri note -- In case you haven't seen it yet, all the cool people who mess around with biomedical sourcing generally use the Diberri template filler tool, located here. You supply it a PMID and it fills in all the required fields, copy-and-paste, done. It seems to be the standard (to the degree anything on Wikipedia can have a standard) template filler for things with PMIDs. I did a few in the article today. Not critical for GA but the ref cites would need to be standardized for FA. Zad68 17:15, 15 August 2013 (UTC)

I've been trying to use it but it's always down. :( The next time it's up I'm going to get all the refs in a row! Keilana|^{Parlez ici} 18:57, 15 August 2013 (UTC)

General comments

• The prose is uneven and opaque in many places. The information is in there but it's hard for a typical lay reader to access - this is pretty important. Consider your audience to be a bright 15-year-old with no medical training. Would such a reader be able to access the information the article is trying to communicate? Yes, a lot of this information is based on specialist knowledge, but even so, organize the paragraphs of your sections so that the first paragraph is a very accessible overview that doesn't overwhelm with heavy technical detail, and then the following paragraphs in the section can build on that. This allows the reader not so interested in slogging through heavy technical detail to get the gist from the first paragraph and then skip to the next section.

I think this is better. I'll see what the GA reviewer says and either get a copyeditor before GA or after. Keilana|^{Parlez ici} 03:20, 20 August 2013 (UTC)

• "Birt-Hogg-Dubé" is repeated a lot, consider using "BHD" sometimes or look for ways to use pronouns to refer to it

I've gone through an gotten rid of as many as I could. Keilana|^{Parlez ici} 03:28, 20 August 2013 (UTC)

• Try to have a consistent "in-line explainer" style. Sometimes it's with hypens - short horizontal dashes. Sometimes it's in parentheses (a pair of curved lines). Doesn't matter which you pick but I find it a little jarring to see different styles used. This is a small nitpick.

Think I caught them all! Keilana|^{Parlez ici} 03:28, 20 August 2013 (UTC)

• The info about mosquitoes and dogs should probably be moved to its own section "Other animals" per WP:MEDMOS.

Did this, and found a couple more animals to add to the mix. :) Keilana|^{Parlez ici} 21:01, 26 July 2013 (UTC)

Section-by-section comments

• Lead needs expansion, although I don't often bother writing the lead until the body is done, maybe you're doing the same thing.

That's how I work too, it's expanded quite a bit now. Keilana|^{Parlez ici} 20:38, 17 August 2013 (UTC)

• Epidemiology doesn't need It was first described in 1977. in it, that's already in History where it should be.

Removed from Epidemiology. Keilana|^{Parlez ici} 21:02, 26 July 2013 (UTC)

• Could use general copyediting for clarity and simplicity. Clarity can be improved by splitting up run-on sentences, example These growths typically first appear in a person's twenties or thirties and are found in more than 80% of people with the syndrome after this age[2] and become larger and more numerous over time.

I'll have a go at it. Is there anyone in particular you'd recommend as a copyeditor? Keilana|^{Parlez ici} 21:19, 26 July 2013 (UTC)

I just finished a chunk of work and might have a go at some copyediting if that'd be OK with you. I'm not the best copyeditor I know but I can be helpful. Zad68 21:23, 26 July 2013 (UTC)

Well I had intended to try to do some copyediting but, well, didn't. Sorry! I had a hard time internalizing the content so that I could re-present it in the desired kind of prose, and I couldn't develop the enthusiasm for really digging into the sources. But it does look like you've made some good strides in making the information more accessible. As always you can ask for help at WT:MED. Also I know there's the WP:GOCE although I haven't tried asking there before, and it'd be interesting if you can find someone there willing to take on a technical article like this. It'd be ideal to find someone with particular expertise in genetic diseases but I can't think of anybody offhand. What you might consider doing is finding a similar GA or FA quality article and find out who brought it up to that standard, and then asking that editor. Zad68 17:08, 15 August 2013 (UTC)

It's totally okay! No worries! I went through it myself and I'll see what the GA reviewer I get says. :) Keilana|^{Parlez ici} 05:29, 19 August 2013 (UTC)

• Women and people who experience a late onset of skin symptoms tend to have less severe phenotypes. - are women not people? This is a bit unclear what populations are being discussed here.

Not sure how to make it clear that there are two separate things associated with less severe phenotypes - being female and having a late onset of skin symptoms. Maybe "Less severe phenotypes are seen in women and people of both sexes who have a late onset of skin symptoms"? Keilana|^{Parlez ici} 21:04, 26 July 2013 (UTC)

• Birt-Hogg-Dubé tumors differ on an individual basis; - meaning between individual tumors or between individual people? This part of the sentence probably should be ended with a colon (to set off a list) as opposed to a semicolon.

Individual people. I think it's clarified now. Keilana|^{Parlez ici} 21:07, 26 July 2013 (UTC)

• A large number of tumors on the face can be associated with hyperseborrhea, abnormally elevated sebum production. - probably "abnormally elevated sebum production" should be put in parethesis as an in-line explainer, instead of after a comma?

Done. Keilana|^{Parlez ici} 21:10, 26 July 2013 (UTC)

• People over 20 ... add "years of age"

Done with a couple other instances. Keilana|^{Parlez ici} 05:47, 19 August 2013 (UTC)

• over 30% of people with Birt-Hogg-Dubé syndrome develop kidney tumors, though estimates range from 15%-30%. - this disagreement between the sources needs to be handled more elegantly

Reworded to "Estimates of the incidence among people with the disease range from 14%–34%". Keilana|^{Parlez ici} 05:49, 19 August 2013 (UTC)

• Though pneumothorax in Birt-Hogg-Dubé patients - per WP:MEDMOS we try to avoid "patient"

I think I got all of them. Keilana|^{Parlez ici} 06:40, 19 August 2013 (UTC)

• "Clinical Triad" section - the actual triad of cutaneous manifestations, lung cysts/spontaneous pneumothorax, and renal tumors should be highlighted more clearly. Each numbered item should start with the words naming the triad item. The way it's done now, the information is getting a bit buried in detail. I'm not a fan of lists like this in articles anyway, see WP:USEPROSE. Consider eliminating the numbered list altogether, although that's just my preference.

I've made it prose and I think the triad is pretty clear. Keilana|^{Parlez ici} 06:40, 19 August 2013 (UTC)

• History - need to explain who Hornstein and Knickenberg were and why they were important.

Done. Keilana|^{Parlez ici} 03:16, 20 August 2013 (UTC)

• The BHD Foundation supports research into BHD syndrome and holds regular symposia in BHD and related disorders for researchers, clinicians, and family members. - a secondary source is really needed to demonstrate that the BHD Foundation is noteworthy enough for mention here.

Taken care of above. Keilana|^{Parlez ici} 03:16, 20 August 2013 (UTC)

• Images seem appropriate and properly licensed. More would be nice.

I've added a few more. Keilana|^{Parlez ici} 05:58, 19 August 2013 (UTC)

Overall it's coming along nicely and you should be proud of your work! Looking forward to seeing this show up in the GAN queue, let me know if you want any more feedback from me or have any questions. Zad68 02:12, 18 July 2013 (UTC)

Thanks so much Zad, I'll keep plugging away! If I have questions I'll hunt you down. :) I am so very grateful for the review! Best, Keilana|^{Parlez ici} 15:57, 18 July 2013 (UTC)

• some families with FLCN mutations develop only kidney tumors or spontaneous pneumothorax - "FLCN mutation" hadn't been mentioned up to this point, need to explain what it is and why it's important/relevant before using it

Rewrote for clarity. Keilana|^{Parlez ici} 03:19, 20 August 2013 (UTC)

Article title - dashes vs. hyphens

The current article title is Birt–Hogg–Dubé syndrome with – dashes instead of - hyphens. Shouldn't the article title have keyboard-friendly hyphens instead of the dashes? If there's no objection I'd like to move the article to a title with hyphens instead of dashes. Zad68 01:30, 19 July 2013 (UTC)

@Zad68: I would prefer that, is there anything in WP:MOS or WP:MEDMOS that prevents it? If there is then I suppose the redirect works... Keilana|^{Parlez ici} 21:15, 19 July 2013 (UTC)

Are you saying you'd like the article title to keep the en-dashes in it? I'll have to find it in the guidelines but I'm pretty sure characters that are easily typed on a normal keyboard are preferred for titles, especially if a trivial substitution can be made, like a hyphen for an en-dash. This is pretty low on my list of priority items but I thought I remember seeing it somewhere in the WP:MOS, I'll see if I can find it. Zad68 16:31, 25 July 2013 (UTC)

No, I think the hyphens is easiest! Sorry that came across wrong. I'll move it and deal with the redirects today. Keilana|^{Parlez ici} 16:34, 25 July 2013 (UTC)

OK! I just saw WP:TITLESPECIALCHARACTERS, and it doesn't directly address it, it just says if the best title does have non-keyboard-typeable characters, use a redirect... Zad68 16:38, 25 July 2013 (UTC)

Awesome, moving it seems to make the most sense. :) Now on to dealing with MEDRS compliance... Keilana|^{Parlez ici} 16:40, 25 July 2013 (UTC)

No! I have just come across this discussion. Please see my comments at WT:MED. Axl ¤ [Talk] 10:02, 27 July 2013 (UTC)

No? Argh, sorry. :( I saw you moved it, is it sorted? Keilana|^{Parlez ici} 16:41, 27 July 2013 (UTC)

The article title is fine now. So is the lead section. There are still several places in the text where the dashes need to be fixed. Axl ¤ [Talk] 16:52, 27 July 2013 (UTC)

Just went through it with the dash script and advisor.js. Does it look okay now? Keilana|^{Parlez ici} 17:54, 27 July 2013 (UTC)

Y Thanks for catching and fixing my fork-up, Axl. Zad68

You're welcome. :-) "Birt–Hogg–Dubé" has been fixed throughout. However the abbreviation "BHD" is used in various places. This should be standardized. I fixed a couple of eponymous syndrome names in the "Differential diagnosis" subsection ("von Hippel–Lindau" and "Ehlers–Danlos"). The "Pathophysiology" section has spaced emdashes, which are incorrect. Axl ¤ [Talk] 22:38, 30 July 2013 (UTC)

@Axl: Thank you so much! I'm really bad with little formatting things. What should we use in "Pathophysiology" (and how do I type it? :P)? Keilana|^{Parlez ici} 14:30, 31 July 2013 (UTC)

The dashes should be either unspaced emdashes or spaced endashes. (The subsection "Skin" uses unspaced emdashes, so this would be preferable for consistency.) I use — to insert an emdash, or you can use the "Wiki markup" box at the bottom of the editing window to insert one. Axl ¤ [Talk] 18:26, 31 July 2013 (UTC)

That's wonderful, thank you! I'll run along and implement it now. Keilana|^{Parlez ici} 23:28, 31 July 2013 (UTC)

I have fixed the dashes. Axl ¤ [Talk] 09:20, 2 August 2013 (UTC)

I'm a dipshit and forgot. Thanks for picking up after me! ;) Keilana|^{Parlez ici} 15:59, 2 August 2013 (UTC)

GA Review

This review is transcluded from Talk:Birt–Hogg–Dubé syndrome/GA1. The edit link for this section can be used to add comments to the review.

Reviewer: Cryptic C62 (talk · contribs) 16:15, 23 August 2013 (UTC)

Overall, the article looks pretty solid. We'll run through the article to fix up minor problems, and then this should be an easy pass.

Prose

• "a human autosomal dominant genetic disorder that involves susceptibility to" I suggest changing "involves" to "can cause".

 Done

• "Typically, they first appear in a person's 20s or 30s, and are found in more than 80% of people with the syndrome after this age." The use of 'this age' suggests a specific number, but it's not clear what that number would be. This also appears to be somewhat inconsistent with the lead. Unless I'm mistaken, both problems can be addressed by changing "after this age" with "above the age of 40" or some such.

 Done

• Avoid beginning paragraphs with phrasing that relies upon the viewer having read the previous paragraph. This is especially true for the openings of sections (italics added for emphasis):
  • "People over 20 years of age with Birt–Hogg–Dubé syndrome also have an increased risk"

 Done

• • "Additionally, affected individuals frequently develop..."

 Done

• "people with Birt–Hogg–Dubé syndrome are at seven times the risk of kidney cancer compared to the unaffected population. Estimates of the incidence among people with the disease range from 14%–34%" These two claims seem incompatible with one another. "seven times the risk" is very precise, but "14%–34%" is a pretty wide range. How can both of these be true? Perhaps "seven times the risk" should be changed to "roughly seven times more likely"

Yeah, there's a really wide range of estimates, that's a product of the small number of affected families. I've gone with "roughly seven times the risk", is that okay? Keilana|^{Parlez ici} 22:30, 31 August 2013 (UTC)

Works for me! --Cryptic C62 · Talk 03:14, 5 September 2013 (UTC)

Organization

• The image in the infobox definitely needs a caption. I couldn't figure out what the symptoms of the syndrome were until I started reading through the intro.

For some reason the caption doesn't show up even when it's in the "caption" parameter of the infobox. Keilana|^{Parlez ici} 22:30, 31 August 2013 (UTC)

Fixed. --Cryptic C62 · Talk 03:14, 5 September 2013 (UTC)

• Captions which are complete sentences should end with a period. Captions that are not complete sentences should not.

 Done

• Is there any way to expand the Epidemiology section?

Not really, since the disorder is so uncommon there's not a lot of information beyond what's there. Keilana|^{Parlez ici} 22:54, 31 August 2013 (UTC)

• "Less severe phenotypes are seen in women" Seems like something that belongs in Epidemiology

 Done

• Avoid one-sentence paragraphs, such as the BHD Foundation in the History section. If it's notable enough to be mentioned, it deserves a few more sentences. Otherwise, delete it.

I think it deserves a mention but don't think much more should be written about it. I've merged that sentence into the previous paragraph. Keilana|^{Parlez ici} 22:54, 31 August 2013 (UTC)

• Regarding the various Other animals subsections: I think these should either be expanded or simply merged together. As it stands right now, there's clearly enough information for an Other animals section, but not enough on each animal to subdivide further.

There's not much more to write that isn't molecular biology cruft so I've merged them all together. Keilana|^{Parlez ici} 22:54, 31 August 2013 (UTC)

Sources

• The article makes extensive use of peer-reviewed journals and books. Great!
• The citations are clear, consistent, and appear to provide hyperlinks whenever possible.
• I think we can do a better job of indicating where to find information within each source, particularly those that are more than 3 or 4 pages long. The {{rp}} template is very handy for this purpose, though you are free to use another method if you know of one.

I think I'm going to see if {{sfn}} is a viable option, if not, I'll try {{rp}}. Keilana|^{Parlez ici} 22:54, 31 August 2013 (UTC)

I'll continue the prose review the above issues are addressed. --Cryptic C62 · Talk 16:15, 23 August 2013 (UTC)

@Cryptic C62: Thank you so much for reviewing! I just started a new semester at university so it may take me a few days to have time to respond. I hope that's okay - I will respond as soon as I can! Keilana|^{Parlez ici} 19:11, 26 August 2013 (UTC)

@Keilana: It's all good, mate. Take as much time as you need. --Cryptic C62 · Talk 20:45, 26 August 2013 (UTC)

@Cryptic C62: I think I've taken care of everything that I can except the footnotes, which are in progress. :) Keilana|^{Parlez ici} 22:54, 31 August 2013 (UTC)

@Cryptic C62: Hi, sorry it took me so long, but I've finished putting page numbers in the shortened footnotes. Let me know if they're okay or if there's something I overlooked. Thanks so much for your patience and review! Keilana|^{Parlez ici} 21:14, 7 September 2013 (UTC)

@Keilana: We're all set! I hereby proclaim this GAN successful. --Cryptic C62 · Talk 22:39, 7 September 2013 (UTC)

Red links

Not a GA requirement but turning the red links into redirects or adding something to them always makes the article look nicer. Doc James (talk · contribs · email) (if I write on your page reply on mine) 13:18, 31 August 2013 (UTC)

• From WP:REDLINK: "A red link to an article that will plausibly be created in the future should be left alone rather than being created as a minimal stub article that has no useful information." --Cryptic C62 · Talk 17:26, 1 September 2013 (UTC)

Who suggested that "no useful information" was to be added to them? A sentence or two saying what something is is all one needs. Doc James (talk · contribs · email) (if I write on your page reply on mine) 08:29, 8 September 2013 (UTC)

@Jmh649: Hi Doc James, I got rid of all but 3; I don't think I'm knowledgeable enough to write about the redlinks left. Keilana|^{Parlez ici} 21:31, 7 September 2013 (UTC)

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Remove Patient Registry section? Comment Suggestion

The section near the end of this article on the NIH patient registry is short and specific only to the US; it is also non-specific to this particular condition and would apply to any rare lung diseases. Would it be appropriate to just remove the section? Myoglobin (talk) 13:41, 27 February 2022 (UTC)