Selaginella moellendorffii
| Selaginella moellendorffii | |
|---|---|
| |
Scientific classification 
| |
| Kingdom: | Plantae |
| Clade: | Tracheophytes |
| Clade: | Lycophytes |
| Class: | Lycopodiopsida |
| Order: | Selaginellales |
| Family: | Selaginellaceae |
| Genus: | Selaginella |
| Species: | S. moellendorffii
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| Binomial name | |
| Selaginella moellendorffii | |
Selaginella moellendorffii is a lycophyte that is an important model organism, especially in comparative genomics. S. moellendorffii is a member of an ancient vascular plant lineage that first appeared in the fossil record some 400 million years ago. They would later form a dominant part of the world's flora during the Carboniferous period. They have a number of unusual and/or "primitive" features, such as rudimentary leaves (microphylls), ubiquitous dichotomous branching, heterospory, and the ligule. As the earliest diverging group of modern vascular plants, they are essential to understanding the evolution of plants as a whole.
Genome sequencing
[edit]The nuclear genome size is approximately 100 mega base pairs, one of the smaller genome sizes found for any plant species. The genome has been sequenced and assembled by the United States Department of Energy's Joint Genome Institute (DOE JGI).[1] Community annotation of the genes and other elements of this genome began in September 2007. Gene content of S. moellendorffii and diverse other taxa have showed that the transition from gametophyte- to sporophyte- dominated life cycle entailed the addition of fewer new genes than the move from nonseed vascular plants (lycophytes) to flowering plants (angiosperms).[2]
Hecht et al., 2011 finds that S. moellendorffii has the highest guanine + cytosine content of any organellar DNA.[3] Its mitochondrial DNA is 68% G+C; both are typically rare components of any organellar DNA.[3]
References
[edit]- ^ Selaginella moellendorffii v1.0, United States Department of Energy Joint Genomics Institute (DOE JGI), 2007, retrieved 2008-02-26
- ^ Banks, Jo Ann; Nishiyama, Tomoaki; Hasebe, Mitsuyasu; Bowman, John L.; Gribskov, Michael; dePamphilis, Claude; Albert, Victor A.; Aono, Naoki; Aoyama, Tsuyoshi (2011-05-20). "The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants". Science. 332 (6032): 960–963. doi:10.1126/science.1203810. ISSN 0036-8075. PMC 3166216. PMID 21551031.
- ^ a b This review David Roy Smith; Patrick J. Keeling (2015). "Mitochondrial and plastid genome architecture: Reoccurring themes, but significant differences at the extremes". Proceedings of the National Academy of Sciences. 112: 10177–10184. cites Julia Hecht; Felix Grewe; Volker Knoop (2011). "Extreme RNA Editing in Coding Islands and Abundant Microsatellites in Repeat Sequences of Selaginella moellendorffii Mitochondria: The Root of Frequent Plant mtDNA Recombination in Early Tracheophytes". Genome Biology and Evolution. 3: 344–358. doi:10.1093/gbe/evr027. PMC 5654404. S2CID 12973234.
External links
[edit]- American Society for Plant Biology Selaginella education page
- Selaginella genomics website - contribute to the genome annotation
- Purdue University's Selaginella Wiki