rpfG RNA motif
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|
| rpfG | |
|---|---|
 Consensus secondary structure and sequence conservation of rpfG RNA | |
| Identifiers | |
| Symbol | rpfG |
| Rfam | RF03023 |
| Other data | |
| RNA type | Gene; sRNA |
| SO | SO:0001263 |
| PDB structures | PDBe |
The rpfG RNA motif is a conserved RNA structure that was discovered by bioinformatics.[1] The rpfG RNA motif is found in the genus Xanthomonas.
rpfG RNAs are located upstream of rpfG genes, which likely function as part of cyclic di-GMP signaling by degrading this molecule. This observation might suggest that rpfG RNAs function as cis-regulatory elements.
References
[edit]- ^ Weinberg Z, Lünse CE, Corbino KA, Ames TD, Nelson JW, Roth A, Perkins KR, Sherlock ME, Breaker RR (October 2017). "Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions". Nucleic Acids Res. 45 (18): 10811–10823. doi:10.1093/nar/gkx699. PMC 5737381. PMID 28977401.