Cow-rumen RNA motif
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| cow-rumen-3 | |
|---|---|
 Consensus secondary structure and sequence conservation of cow-rumen-3 RNA | |
| Identifiers | |
| Symbol | cow-rumen-3 |
| Rfam | RF03083 |
| Other data | |
| RNA type | Gene; sRNA |
| SO | SO:0001263 |
| PDB structures | PDBe |
Cow-rumen RNA motifs refer to conserved RNA structures discovered by bioinformatics that are found exclusively in metagenomics DNA samples isolated from cow rumen. Thus, the organisms containing these RNAs have not yet been determined. Organisms that are common in rumen have been studied.
The cow-rumen-1 to -4[1] motifs likely function in trans as sRNAs.
References
[edit]- ^ Weinberg Z, Lünse CE, Corbino KA, Ames TD, Nelson JW, Roth A, Perkins KR, Sherlock ME, Breaker RR (October 2017). "Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions". Nucleic Acids Res. 45 (18): 10811–10823. doi:10.1093/nar/gkx699. PMC 5737381. PMID 28977401.