Corio-PBP RNA motif
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| Corio-PBP | |
|---|---|
 Consensus secondary structure and sequence conservation of Corio-PBP RNA | |
| Identifiers | |
| Symbol | Corio-PBP |
| Rfam | RF02945 |
| Other data | |
| RNA type | Gene; sRNA |
| SO | SO:0001263 |
| PDB structures | PDBe |
The Corio-PBP RNA motif is a conserved RNA structure that was discovered by bioinformatics.[1] Corio-PBP motifs are found in Coriobacteriaceae, which is a lineage of Actinomycetota.
It is ambiguous whether Corio-PBP RNAs function as cis-regulatory elements or whether they operate in trans. Corio-PBP RNAs are often located upstream of genes encoding periplasmic-binding protein transporters. However, the substrate specificity of these transporters has not been determined.
References
[edit]- ^ Weinberg Z, Lünse CE, Corbino KA, Ames TD, Nelson JW, Roth A, Perkins KR, Sherlock ME, Breaker RR (October 2017). "Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions". Nucleic Acids Res. 45 (18): 10811–10823. doi:10.1093/nar/gkx699. PMC 5737381. PMID 28977401.