File:IBD segment detected by HapFABIA in 1000Genomes.png
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Summary
| Description |
English: An IBD segment detected by HapFABIA matching the Denisova genome shared exclusively among Asians. The data analyzed by HapFABIA were phased genotypes from chromosome 1 of the 1000 Genomes Project. The rows denote all individuals that contain the IBD segment and columns consecutive SNVs. Major alleles are shown in yellow, minor alleles belonging to the IBD segment in purple, and other minor alleles in turquoise. The row labeled "model L" indicates rare SNVs that tag the IBD segment (tagSNVs). The rows "Ancestor", "Neandertal", and "Denisova" show bases of the respective genomes in purple if they match the minor allele of the tagSNVs (in yellow otherwise). Neandertal tagSNV bases that are not called are shown in orange. |
| Date | |
| Source | I generated this figure with the HapFABIA software and the R programming environment. |
| Author | Gklambauer |
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Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.2 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the section entitled GNU Free Documentation License. |
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| Date/Time | Thumbnail | Dimensions | User | Comment | |
|---|---|---|---|---|---|
| current | 12:59, 21 January 2014 | | 7,200 × 4,200 (144 KB) | Gklambauer | {{subst:Upload marker added by en.wp UW}} {{Information |Description = {{en|An IBD segment detected by HapFABIA matching the Denisova genome shared exclusively among Asians. The data analyzed by HapFABIA were phased genotypes from chromosome 1 of the 1... |
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