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English: Maximum clade credibility tree of arteriviruses representing all currently known species based on the sequence of ORF 1b. Phylogenetic inference using Bayesian phylogenetics shows that OSV-1 variants A–C (marked in red) cluster together but are separate from other arteriviruses. The numbers at the different nodes indicate the posterior probabilities of the accuracy of loci, given the used data and chosen model and parameters. The tree is drawn to scale, with branch lengths representing the number of substitutions per site. GenBank accession numbers of all used sequences are included in brackets. *Previous designation (C/P) of lactate dehydrogenase-elevating virus strains 2/1. †As of now, these viruses have not yet been described and are known only as ‘rat/rodent arterivirus(es)’.
Date
Source Vanmechelen, B., Vergote, V., Laenen, L. et al. Expanding the Arterivirus Host Spectrum: Olivier’s Shrew Virus 1, A Novel Arterivirus Discovered in African Giant Shrews. Sci Rep 8, 11171 (2018). https://doi.org/10.1038/s41598-018-29560-x
Author Bert Vanmechelen, Valentijn Vergote, Lies Laenen, Fara Raymond Koundouno, Joseph Akoi Bore, Jiro Wada, Jens H. Kuhn, Miles W. Carroll, and Piet Maes

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Maximum clade credibility tree of arteriviruses representing all currently known species based on the sequence of ORF 1b.

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24 July 2018

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