ATRAID

ATRAID
Identifiers
Aliases	ATRAID, APR--3, APR-3, APR3, C2orf28, PRO240, p18, HSPC013, all-trans retinoic acid induced differentiation factor
External IDs	MGI: 1918918; HomoloGene: 15412; GeneCards: ATRAID; OMA:ATRAID - orthologs
Gene location (Human)
Chr.	Chromosome 2 (human)
End	27,217,178 bp
Gene location (Mouse)
Chr.	Chromosome 5 (mouse)
End	31,211,967 bp
RNA expression pattern
	Top expressed in
	beta cell; ; corpus epididymis; ; right uterine tube; ; apex of heart; ; left ovary; ; right ovary; ; right auricle; ; right testis; ; left lobe of thyroid gland; ; right lobe of thyroid gland;
	Top expressed in
	right kidney; ; optic nerve; ; arcuate nucleus; ; umbilical cord; ; median eminence; ; islet of Langerhans; ; vestibular sensory epithelium; ; human kidney; ; yolk sac; ; white adipose tissue;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	protein binding; molecular function;
Cellular component	perinuclear region of cytoplasm; integral component of membrane; lysosomal membrane; plasma membrane; nuclear envelope; membrane; nucleus;
Biological process	regulation of gene expression; negative regulation of osteoblast proliferation; cell differentiation; positive regulation of osteoblast differentiation; positive regulation of bone mineralization;
	Sources:Amigo / QuickGO
Orthologs
	51374
	381629
	ENSG00000138085
	ENSMUSG00000013622
	Q6UW56
	Q6PGD0
	NM_080592; NM_001170795; NM_016085
	NM_027855; NM_212470
	NP_001164266; NP_057169
	NP_082131; NP_997635
	Wikidata
View/Edit Human	View/Edit Mouse

Apoptosis-related protein 3 is a protein that in humans is encoded by the ATRAID gene.^[5]^[6]^[7]

This gene is thought to be involved in apoptosis, and may also be involved in hematopoietic development and differentiation. Two alternatively spliced transcript variants encoding different isoforms have been found for this gene.^[7]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000138085 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000013622 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Zhang QH, Ye M, Wu XY, Ren SX, Zhao M, Zhao CJ, Fu G, Shen Y, Fan HY, Lu G, Zhong M, Xu XR, Han ZG, Zhang JW, Tao J, Huang QH, Zhou J, Hu GX, Gu J, Chen SJ, Chen Z (Nov 2000). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC 310934. PMID 11042152.
^ Zhu F, Yan W, Zhao ZL, Chai YB, Lu F, Wang Q, Peng WD, Yang AG, Wang CJ (Nov 2000). "Improved PCR-based subtractive hybridization strategy for cloning differentially expressed genes". BioTechniques. 29 (2): 310–3. doi:10.2144/00292st06. PMID 10948432.
^ ^a ^b "Entrez Gene: C2orf28 chromosome 2 open reading frame 28".

External links

Human ATRAID genome location and ATRAID gene details page in the UCSC Genome Browser.

Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Clark HF, Gurney AL, Abaya E, et al. (2003). "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment". Genome Res. 13 (10): 2265–70. doi:10.1101/gr.1293003. PMC 403697. PMID 12975309.
Zhang Z, Henzel WJ (2005). "Signal peptide prediction based on analysis of experimentally verified cleavage sites". Protein Sci. 13 (10): 2819–24. doi:10.1110/ps.04682504. PMC 2286551. PMID 15340161.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Hillier LW, Graves TA, Fulton RS, et al. (2005). "Generation and annotation of the DNA sequences of human chromosomes 2 and 4". Nature. 434 (7034): 724–31. Bibcode:2005Natur.434..724H. doi:10.1038/nature03466. PMID 15815621.
Yang G, Yu F, Fu H, et al. (2007). "Identification of the distinct promoters for the two transcripts of apoptosis related protein 3 and their transcriptional regulation by NFAT and NFkappaB". Mol. Cell. Biochem. 302 (1–2): 187–94. doi:10.1007/s11010-007-9440-7. PMID 17387583. S2CID 1525070.
Yu F, Yang G, Zhao Z, et al. (2007). "Apoptosis related protein 3, an ATRA-upregulated membrane protein arrests the cell cycle at G1/S phase by decreasing the expression of cyclin D1". Biochem. Biophys. Res. Commun. 358 (4): 1041–6. doi:10.1016/j.bbrc.2007.05.049. PMID 17524364.

This article on a gene on human chromosome 2 is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000138085 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000013622 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid11042152-5] Zhang QH, Ye M, Wu XY, Ren SX, Zhao M, Zhao CJ, Fu G, Shen Y, Fan HY, Lu G, Zhong M, Xu XR, Han ZG, Zhang JW, Tao J, Huang QH, Zhou J, Hu GX, Gu J, Chen SJ, Chen Z (Nov 2000). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC 310934. PMID 11042152.

[pmid10948432-6] Zhu F, Yan W, Zhao ZL, Chai YB, Lu F, Wang Q, Peng WD, Yang AG, Wang CJ (Nov 2000). "Improved PCR-based subtractive hybridization strategy for cloning differentially expressed genes". BioTechniques. 29 (2): 310–3. doi:10.2144/00292st06. PMID 10948432.

[entrez-7] "Entrez Gene: C2orf28 chromosome 2 open reading frame 28".

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[2]

[3]

[4]

[5]

[6]

[7]

References

External links

Further reading